FastQCFastQC Report
quarta 20 nov 2019
chip1.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filenamechip1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19453108
Sequences flagged as poor quality0
Sequence length49
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGAAG41350.05.768867543
GATCGGA52250.05.429136343
ATCGGAA48200.05.3502943
CGGAAGA42150.05.14952243
Produced by FastQC (version 0.11.5)